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KMID : 1025520210630020461
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Journal of Animal Science and Technology
2021 Volume.63 No. 2 p.461 ~ p.464
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Complete genome sequence of Escherichia coli K_EC180, a bacterium producing shiga-like toxin isolated from swine feces
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Kim Hye-Ri
Cho Jae-Hyoung
Cho Jin-Ho
Song Min-Ho
Shin Hak-Dong
Kim Sheen-A
Kim Eun-Sol
Kim Hyeun-Bum
Lee Ju-Hoon
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Abstract
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Escherichia coli normally colonizes the lower intestine of animals and humans, but some serotypes are foodborne pathogens. The Escherichia coli K_EC180 was isolated from swine feces that were collected from a weaner pig. In this genome announcement, E. coli K_EC180 was sequenced using PacBio RS II and Illumina NextSeq 500 platforms. The complete chromosome of E. coli K_EC180 is composed of one circular chromosome (5,017,281 bp) with 50.4% of guanine + cytosine (G + C) content, 4,935 of coding sequence (CDS), 88 of tRNA, and 22 of rRNA genes. The complete genome of E. coli K_EC180 contains the toxin genes such as shiga-like toxins (stxA and stxB).
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KEYWORD
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Escherichia coli K_EC180, Swine feces, Whole genome sequencing, Shiga-like toxin
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